ENSCWAP00000001752 protein (Catagonus wagneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSCWAP00000001752

annotation not available (1084 aa)

Predicted Functional Partners:

ENSCWAP00000004791

0.936

GUCA1B

0.922

NPPA

0.920

NPPC

0.908

PDE2A

0.905

PDE6C

0.897

PDE6A

0.897

PDE6B

0.894

PDE3A

0.882

PDE5A

0.882

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCWAP00000001752	ENSCWAP00000004791	ENSCWAP00000001752	ENSCWAP00000004791	annotation not available	annotation not available	0.936
ENSCWAP00000001752	GUCA1B	ENSCWAP00000001752	ENSCWAP00000004765	annotation not available	Guanylate cyclase activator 1B.	0.922
ENSCWAP00000001752	NPPA	ENSCWAP00000001752	ENSCWAP00000008634	annotation not available	Natriuretic peptide A.	0.920
ENSCWAP00000001752	NPPC	ENSCWAP00000001752	ENSCWAP00000004946	annotation not available	Natriuretic peptide C.	0.908
ENSCWAP00000001752	PDE2A	ENSCWAP00000001752	ENSCWAP00000007203	annotation not available	Phosphodiesterase 2A.	0.905
ENSCWAP00000001752	PDE3A	ENSCWAP00000001752	ENSCWAP00000022739	annotation not available	Phosphodiesterase 3A.	0.882
ENSCWAP00000001752	PDE5A	ENSCWAP00000001752	ENSCWAP00000023289	annotation not available	Phosphodiesterase 5A.	0.882
ENSCWAP00000001752	PDE6A	ENSCWAP00000001752	ENSCWAP00000007904	annotation not available	Phosphodiesterase 6A.	0.897
ENSCWAP00000001752	PDE6B	ENSCWAP00000001752	ENSCWAP00000005230	annotation not available	Phosphodiesterase 6B.	0.894
ENSCWAP00000001752	PDE6C	ENSCWAP00000001752	ENSCWAP00000004706	annotation not available	Phosphodiesterase 6C.	0.897
ENSCWAP00000004791	ENSCWAP00000001752	ENSCWAP00000004791	ENSCWAP00000001752	annotation not available	annotation not available	0.936
ENSCWAP00000004791	GUCA1B	ENSCWAP00000004791	ENSCWAP00000004765	annotation not available	Guanylate cyclase activator 1B.	0.927
ENSCWAP00000004791	PDE5A	ENSCWAP00000004791	ENSCWAP00000023289	annotation not available	Phosphodiesterase 5A.	0.457
ENSCWAP00000004791	PDE6A	ENSCWAP00000004791	ENSCWAP00000007904	annotation not available	Phosphodiesterase 6A.	0.483
GUCA1B	ENSCWAP00000001752	ENSCWAP00000004765	ENSCWAP00000001752	Guanylate cyclase activator 1B.	annotation not available	0.922
GUCA1B	ENSCWAP00000004791	ENSCWAP00000004765	ENSCWAP00000004791	Guanylate cyclase activator 1B.	annotation not available	0.927
GUCA1B	PDE6A	ENSCWAP00000004765	ENSCWAP00000007904	Guanylate cyclase activator 1B.	Phosphodiesterase 6A.	0.554
GUCA1B	PDE6B	ENSCWAP00000004765	ENSCWAP00000005230	Guanylate cyclase activator 1B.	Phosphodiesterase 6B.	0.668
GUCA1B	PDE6C	ENSCWAP00000004765	ENSCWAP00000004706	Guanylate cyclase activator 1B.	Phosphodiesterase 6C.	0.634
NPPA	ENSCWAP00000001752	ENSCWAP00000008634	ENSCWAP00000001752	Natriuretic peptide A.	annotation not available	0.920