STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHST10Carbohydrate sulfotransferase 10. (353 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
     
 0.946
B3GAT1
Beta-1,3-glucuronyltransferase 1.
     
 0.926
B3GAT2
Beta-1,3-glucuronyltransferase 2.
     
 0.912
B3GAT3
Beta-1,3-glucuronyltransferase 3.
     
 0.822
ENSCWAP00000023801
annotation not available
      
 0.699
CHST12
Carbohydrate sulfotransferase 12.
     
 0.606
ZC3H13
Zinc finger CCCH-type containing 13.
      
 0.601
USP40
Ubiquitin specific peptidase 40.
      
 0.597
ITIH2
Inter-alpha-trypsin inhibitor heavy chain 2.
      
 0.590
CPB2
Carboxypeptidase B2.
      
 0.588
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.