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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO47F-box protein 47. (451 aa)    
Predicted Functional Partners:
C1orf109
Chromosome 1 open reading frame 109.
   
    0.794
ENSCWAP00000029374
annotation not available
   
    0.727
FBXO42
F-box protein 42.
      
 0.704
C15orf40
Chromosome 15 open reading frame 40.
   
    0.659
DYDC1
DPY30 domain containing 1.
      
 0.659
CALHM6
Calcium homeostasis modulator family member 6.
   
    0.601
CALHM5
Calcium homeostasis modulator family member 5.
   
    0.601
ENSCWAP00000011852
annotation not available
   
    0.601
LIX1L
Limb and CNS expressed 1 like.
   
    0.601
CALHM2
Calcium homeostasis modulator family member 2.
   
    0.601
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.