STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKRAProtein activator of interferon induced protein kinase EIF2AK2. (313 aa)    
Predicted Functional Partners:
DICER1
Dicer 1, ribonuclease III.
    
 0.998
TARBP2
TARBP2 subunit of RISC loading complex.
  
 
0.994
AGO2
Argonaute RISC catalytic component 2.
    
 0.981
DROSHA
Drosha ribonuclease III.
    
 0.975
LAS1L
LAS1 like ribosome biogenesis factor.
   
 
 0.971
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
  0.968
POP5
POP5 homolog, ribonuclease P/MRP subunit.
     
 0.962
RPP40
Ribonuclease P/MRP subunit p40.
    
  0.956
RPP38
Ribonuclease P/MRP subunit p38.
    
  0.955
DHX9
DExH-box helicase 9.
    
 0.949
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.