STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NKAPNFKB activating protein. (416 aa)    
Predicted Functional Partners:
SLU7
SLU7 homolog, splicing factor.
   
 0.979
CDC40
Cell division cycle 40.
   
  0.974
PRKRIP1
PRKR interacting protein 1.
   
 0.916
ENSCWAP00000025734
annotation not available
   
  0.886
CWC22
CWC22 spliceosome associated protein homolog.
   
  0.865
SDE2
SDE2 telomere maintenance homolog.
    
 0.857
DDX41
DEAD-box helicase 41.
    
  0.836
SYF2
SYF2 pre-mRNA splicing factor.
    
  0.832
PPIL1
Peptidylprolyl isomerase like 1.
    
  0.832
C9orf78
Chromosome 9 open reading frame 78.
   
 
  0.795
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.