STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP2Receptor accessory protein 2. (254 aa)    
Predicted Functional Partners:
RAB3GAP2
RAB3 GTPase activating non-catalytic protein subunit 2.
    
 
 0.775
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
      
 0.755
REEP1
Receptor accessory protein 1.
  
 
 
0.750
TBC1D20
TBC1 domain family member 20.
      
 0.745
RTN3
Reticulon 3.
   
 
 0.745
RTN1
Reticulon 1.
   
 
 0.727
REEP6
Receptor accessory protein 6.
  
 
 
0.720
ATL1
Atlastin GTPase 1.
    
 
 0.711
RTN2
Reticulon 2.
   
 
 0.691
RTP2
Receptor transporter protein 2.
      
 0.690
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.