STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NFIL3Nuclear factor, interleukin 3 regulated. (462 aa)    
Predicted Functional Partners:
NR1D2
Nuclear receptor subfamily 1 group D member 2.
   
 0.960
NR1D1
Nuclear receptor subfamily 1 group D member 1.
   
 0.959
ENSCWAP00000005017
annotation not available
    
 0.953
RORA
RAR related orphan receptor A.
    
 0.945
RORB
RAR related orphan receptor B.
    
 0.945
PER2
Period circadian regulator 2.
    
 0.945
RORC
RAR related orphan receptor C.
    
 0.944
PER1
Period circadian regulator 1.
    
 0.930
ENSCWAP00000015960
annotation not available
   
 0.911
STK40
Serine/threonine kinase 40.
    
   0.903
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.