Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC24ASEC24 homolog A, COPII coat complex component. (1097 aa)    
Predicted Functional Partners:
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
   
 0.999
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.998
SEC31B
SEC31 homolog B, COPII coat complex component.
   
 0.998
SEC24D
SEC24 homolog D, COPII coat complex component.
   
0.997
SEC24C
SEC24 homolog C, COPII coat complex component.
   
0.997
SEC24B
SEC24 homolog B, COPII coat complex component.
  
0.994
SEC23A
Sec23 homolog A, coat complex II component.
   
0.993
SEC23B
SEC23 homolog B, coat complex II component.
   
0.993
SAR1B
Secretion associated Ras related GTPase 1B.
   
 0.983
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene).
    
 0.982
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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