STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FEM1CFem-1 homolog C. (617 aa)    
Predicted Functional Partners:
CUL2
Cullin 2.
    
 0.976
ELOC
Elongin C.
    
 0.959
COPS6
COP9 signalosome subunit 6.
    
 0.890
ENSCWAP00000014943
annotation not available
    
 0.874
ENSCWAP00000023835
annotation not available
    
 0.874
COPS2
COP9 signalosome subunit 2.
    
  0.856
RBX1
Ring-box 1.
    
 0.853
ENSCWAP00000019878
annotation not available
    
 0.847
COPS3
COP9 signalosome subunit 3.
    
 0.839
PPM1F
Protein phosphatase, Mg2+/Mn2+ dependent 1F.
    
 
 0.819
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.