Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDCL3Phosducin like 3. (243 aa)    
Predicted Functional Partners:
CCT2
Chaperonin containing TCP1 subunit 2.
   
 
 0.967
CCT4
Chaperonin containing TCP1 subunit 4.
    
 
 0.965
CCT3
Chaperonin containing TCP1 subunit 3.
    
 
 0.961
CCT7
Chaperonin containing TCP1 subunit 7.
   
 
 0.957
CCT5
Chaperonin containing TCP1 subunit 5.
    
 
 0.953
PDCL
Phosducin like.
    
 
 0.953
TCP1
T-complex 1.
    
 
 0.951
PEX7
Peroxisomal biogenesis factor 7.
   
   0.949
FBXW4
F-box and WD repeat domain containing 4.
    
   0.948
CCT6A
Chaperonin containing TCP1 subunit 6A.
   
 
 0.893
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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