STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMED7Transmembrane p24 trafficking protein 7. (226 aa)    
Predicted Functional Partners:
TLR3
Toll like receptor 3.
    
 0.978
TLR4
Toll like receptor 4.
    
 0.978
TRAF6
TNF receptor associated factor 6.
    
 0.977
TRAF3
TNF receptor associated factor 3.
    
 0.974
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.962
TMED2
Transmembrane p24 trafficking protein 2.
   
 0.945
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.932
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
    
 0.916
TBK1
TANK binding kinase 1.
    
 0.912
ENSCWAP00000017731
annotation not available
    
 0.882
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.