STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SIAH3Siah E3 ubiquitin protein ligase family member 3. (268 aa)    
Predicted Functional Partners:
CACYBP
Calcyclin binding protein.
    
 0.892
PINK1
PTEN induced kinase 1.
    
 0.789
TOMM7
Translocase of outer mitochondrial membrane 7.
     
 0.764
SNCA
Synuclein alpha.
    
 0.730
SNCG
Synuclein gamma.
    
 0.718
ENSCWAP00000006144
annotation not available
    
  0.714
TBL1XR1
Transducin beta like 1 X-linked receptor 1.
    
  0.714
LRCH1
Leucine rich repeats and calponin homology domain containing 1.
      
 0.687
CTNNB1
Catenin beta 1.
    
 0.633
MFN1
Mitofusin 1.
     
 0.625
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.