STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHA3Pleckstrin homology domain containing A3. (300 aa)    
Predicted Functional Partners:
SEC24D
SEC24 homolog D, COPII coat complex component.
    
   0.767
OSBP
Oxysterol binding protein.
    
 
 0.765
SNF8
SNF8 subunit of ESCRT-II.
   
    0.758
GLTP
Glycolipid transfer protein.
      
 0.695
CFAP65
Cilia and flagella associated protein 65.
      
 0.685
PLEKHA8
Pleckstrin homology domain containing A8.
     
  0.681
CEL
Carboxyl ester lipase.
      
 0.674
SEC24B
SEC24 homolog B, COPII coat complex component.
   
 
 0.612
ARL6
ADP ribosylation factor like GTPase 6.
    
 0.598
ENSCWAP00000022564
annotation not available
    
 0.598
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.