STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARL5CADP ribosylation factor like GTPase 5C. (179 aa)    
Predicted Functional Partners:
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.814
COPB1
Coatomer protein complex subunit beta 1.
   
 0.801
COPB2
Coatomer protein complex subunit beta 2.
   
 0.793
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
   
 0.789
ARL5A
ADP ribosylation factor like GTPase 5A.
   
    0.785
COPA
Coatomer protein complex subunit alpha.
    
 0.778
ENSCWAP00000014099
annotation not available
    
 0.775
ARCN1
Archain 1.
   
 0.773
ARFGAP3
ADP ribosylation factor GTPase activating protein 3.
    
 0.750
ARFGAP2
ADP ribosylation factor GTPase activating protein 2.
    
 0.750
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.