Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ETF1Eukaryotic translation termination factor 1. (437 aa)    
Predicted Functional Partners:
GSPT1
G1 to S phase transition 1.
   
 0.998
GSPT2
G1 to S phase transition 2.
   
 0.998
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.993
JMJD4
Jumonji domain containing 4.
    
 0.993
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
    
 
 0.979
UPF1
UPF1 RNA helicase and ATPase.
   
 0.978
RPL8
Ribosomal protein L8.
   
 0.966
RPL27
Ribosomal protein L27.
   
  0.964
RPS5
Ribosomal protein S5.
  
 0.963
ENSCWAP00000019093
annotation not available
   
 0.958
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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