Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADAT2Adenosine deaminase tRNA specific 2. (191 aa)    
Predicted Functional Partners:
TYMS
Thymidylate synthetase.
  
 
 0.879
UPRT
Uracil phosphoribosyltransferase homolog.
   
 0.819
RPUSD1
RNA pseudouridine synthase domain containing 1.
   
 0.792
TK1
Thymidine kinase 1.
    
 0.790
RPUSD3
RNA pseudouridine synthase D3.
   
 0.790
NT5E
5'-nucleotidase ecto.
    
 0.770
RPUSD2
RNA pseudouridine synthase domain containing 2.
   
 0.770
RPUSD4
RNA pseudouridine synthase D4.
   
 0.769
CDA
Cytidine deaminase.
    
 0.766
RBKS
Ribokinase.
    
 0.756
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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