STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPS27LRibosomal protein S27 like. (93 aa)    
Predicted Functional Partners:
ENSCWAP00000011123
annotation not available
   
 0.991
ENSCWAP00000018117
annotation not available
   
 0.991
RPS3A
Ribosomal protein S3A.
   
 0.988
RPS19
Ribosomal protein S19.
   
 0.987
RPS21
Ribosomal protein S21.
   
 0.986
RPS3
Ribosomal protein S3.
   
 0.986
ENSCWAP00000016290
annotation not available
   
 0.986
ENSCWAP00000010981
annotation not available
   
 0.983
RPS5
Ribosomal protein S5.
   
 0.983
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.980
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.