Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM6Tripartite motif containing 6. (508 aa)    
Predicted Functional Partners:
ENSCWAP00000002640
annotation not available
    
 0.779
ENSCWAP00000020442
annotation not available
    
 0.779
ZWINT
ZW10 interacting kinetochore protein.
    
 
 0.749
SQSTM1
Sequestosome 1.
    
 0.649
SUMO1
Small ubiquitin like modifier 1.
    
 0.646
ENSCWAP00000027558
annotation not available
    
 0.646
COL17A1
Collagen type XVII alpha 1 chain.
    
 
 0.600
UBB
Ubiquitin B.
    
  0.590
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
   
 0.589
ILK
Integrin linked kinase.
    
 
 0.587
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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