STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDO1Cysteine dioxygenase type 1. (200 aa)    
Predicted Functional Partners:
CSAD
Cysteine sulfinic acid decarboxylase.
     
 0.952
GADL1
Glutamate decarboxylase like 1.
     
 0.952
GCLC
Glutamate-cysteine ligase catalytic subunit.
     
 0.951
CTH
Cystathionine gamma-lyase.
     
 0.942
ENSCWAP00000023166
annotation not available
   
 
 0.935
GAD2
Glutamate decarboxylase 2.
     
 0.925
GAD1
Glutamate decarboxylase 1.
     
 0.925
GCLM
Glutamate-cysteine ligase modifier subunit.
   
 
 0.912
ENSCWAP00000006692
annotation not available
    
  0.911
RPS27A
Ribosomal protein S27a.
    
  0.911
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.