Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H13Zinc finger CCCH-type containing 13. (1643 aa)    
Predicted Functional Partners:
VIRMA
Vir like m6A methyltransferase associated.
   
 0.992
WTAP
WT1 associated protein.
    
 0.991
RBM15
RNA binding motif protein 15.
   
 0.969
ALYREF
Aly/REF export factor.
   
 0.965
THOC3
THO complex 3.
    
 0.964
THOC1
THO complex 1.
   
 0.964
RBM15B
RNA binding motif protein 15B.
   
 0.959
THOC5
THO complex 5.
   
 0.955
MED4
Mediator complex subunit 4.
   
   0.954
MED29
Mediator complex subunit 29.
    
 
 0.952
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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