ENSCWAP00000001858 protein (Catagonus wagneri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSCWAP00000001858

annotation not available (181 aa)

Predicted Functional Partners:

CSN2

0.995

CSN3

0.986

LALBA

0.959

PLK1

0.802

ENSCWAP00000015777

0.765

TNN

0.730

TNR

0.730

TNC

0.730

ENSCWAP00000002173

0.720

ENSCWAP00000017121

0.718

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSN2	CSN3	ENSCWAP00000001488	ENSCWAP00000001382	Casein beta.	Casein kappa.	0.993
CSN2	ENSCWAP00000001858	ENSCWAP00000001488	ENSCWAP00000001858	Casein beta.	annotation not available	0.995
CSN2	ENSCWAP00000002173	ENSCWAP00000001488	ENSCWAP00000002173	Casein beta.	annotation not available	0.755
CSN2	ENSCWAP00000015777	ENSCWAP00000001488	ENSCWAP00000015777	Casein beta.	annotation not available	0.904
CSN2	ENSCWAP00000017121	ENSCWAP00000001488	ENSCWAP00000017121	Casein beta.	annotation not available	0.772
CSN2	LALBA	ENSCWAP00000001488	ENSCWAP00000028569	Casein beta.	Lactalbumin alpha.	0.980
CSN2	PLK1	ENSCWAP00000001488	ENSCWAP00000002771	Casein beta.	Polo like kinase 1.	0.916
CSN3	CSN2	ENSCWAP00000001382	ENSCWAP00000001488	Casein kappa.	Casein beta.	0.993
CSN3	ENSCWAP00000001858	ENSCWAP00000001382	ENSCWAP00000001858	Casein kappa.	annotation not available	0.986
CSN3	ENSCWAP00000002173	ENSCWAP00000001382	ENSCWAP00000002173	Casein kappa.	annotation not available	0.418
CSN3	ENSCWAP00000015777	ENSCWAP00000001382	ENSCWAP00000015777	Casein kappa.	annotation not available	0.613
CSN3	ENSCWAP00000017121	ENSCWAP00000001382	ENSCWAP00000017121	Casein kappa.	annotation not available	0.901
CSN3	LALBA	ENSCWAP00000001382	ENSCWAP00000028569	Casein kappa.	Lactalbumin alpha.	0.965
ENSCWAP00000001858	CSN2	ENSCWAP00000001858	ENSCWAP00000001488	annotation not available	Casein beta.	0.995
ENSCWAP00000001858	CSN3	ENSCWAP00000001858	ENSCWAP00000001382	annotation not available	Casein kappa.	0.986
ENSCWAP00000001858	ENSCWAP00000002173	ENSCWAP00000001858	ENSCWAP00000002173	annotation not available	annotation not available	0.720
ENSCWAP00000001858	ENSCWAP00000015777	ENSCWAP00000001858	ENSCWAP00000015777	annotation not available	annotation not available	0.765
ENSCWAP00000001858	ENSCWAP00000017121	ENSCWAP00000001858	ENSCWAP00000017121	annotation not available	annotation not available	0.718
ENSCWAP00000001858	LALBA	ENSCWAP00000001858	ENSCWAP00000028569	annotation not available	Lactalbumin alpha.	0.959
ENSCWAP00000001858	PLK1	ENSCWAP00000001858	ENSCWAP00000002771	annotation not available	Polo like kinase 1.	0.802