Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATG12Autophagy related 12. (140 aa)    
Predicted Functional Partners:
ATG7
Autophagy related 7.
    
 0.999
ATG10
Autophagy related 10.
    
 0.999
ATG3
Autophagy related 3.
    
 0.999
ATG5
Autophagy related 5.
   
 0.999
ATG16L1
Autophagy related 16 like 1.
    
 0.999
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.996
ATG16L2
Autophagy related 16 like 2.
    
 0.995
GABARAP
GABA type A receptor-associated protein.
   
 0.981
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.981
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
   
 0.977
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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