STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHRNECholinergic receptor nicotinic epsilon subunit. (494 aa)    
Predicted Functional Partners:
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
   
 0.974
CHRND
Cholinergic receptor nicotinic delta subunit.
   
 0.972
CHRNB1
Cholinergic receptor nicotinic beta 1 subunit.
    
 
 0.948
LYNX1
Ly6/neurotoxin 1.
    
 0.938
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
    
 0.904
LYPD6B
LY6/PLAUR domain containing 6B.
    
 0.875
LYPD6
LY6/PLAUR domain containing 6.
    
 0.874
CHRNA2
Cholinergic receptor nicotinic alpha 2 subunit.
    
 0.872
CHRNA4
Cholinergic receptor nicotinic alpha 4 subunit.
    
 0.872
PATE2
Prostate and testis expressed 2.
     
  0.867
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.