STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRR7Proline rich 7, synaptic. (270 aa)    
Predicted Functional Partners:
FAF2
Fas associated factor family member 2.
      
 0.761
BTNL9
Butyrophilin like 9.
      
 0.757
LMAN2
Lectin, mannose binding 2.
      
 0.749
ENSCWAP00000007593
annotation not available
      
 0.744
TMED9
Transmembrane p24 trafficking protein 9.
      
 0.735
PMS1
PMS1 homolog 1, mismatch repair system component.
      
 0.713
POLR3E
RNA polymerase III subunit E.
      
 0.688
ENSCWAP00000009934
annotation not available
      
 0.684
B4GALT7
Beta-1,4-galactosyltransferase 7.
      
 0.678
TRIM41
Tripartite motif containing 41.
      
 0.675
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.