STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM255ATransmembrane protein 255A. (349 aa)    
Predicted Functional Partners:
WWP1
WW domain containing E3 ubiquitin protein ligase 1.
    
   0.767
ITCH
Itchy E3 ubiquitin protein ligase.
    
   0.753
PIMREG
PICALM interacting mitotic regulator.
      
 0.529
WWP2
WW domain containing E3 ubiquitin protein ligase 2.
    
   0.510
SLC35E4
Solute carrier family 35 member E4.
      
 0.497
ANKUB1
Ankyrin repeat and ubiquitin domain containing 1.
      
 0.493
LRRC71
Leucine rich repeat containing 71.
      
 0.492
FAM216B
Family with sequence similarity 216 member B.
      
 0.453
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
   0.415
SRRM2
Serine/arginine repetitive matrix 2.
  
     0.411
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.