Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001885annotation not available (51 aa)    
Predicted Functional Partners:
RPL8
Ribosomal protein L8.
   
 0.997
RPL23
Ribosomal protein L23.
   
 0.997
ENSCWAP00000013110
annotation not available
  
 0.997
ENSCWAP00000013956
annotation not available
   
 0.997
RPL34
Ribosomal protein L34.
   
 0.997
RPL27
Ribosomal protein L27.
   
 0.997
RPL11
Ribosomal protein L11.
   
 0.996
RPL37
Ribosomal protein L37.
   
 0.995
ENSCWAP00000019509
annotation not available
   
 0.995
RPL21
Ribosomal protein L21.
   
 0.995
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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