STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APH1BAph-1 homolog B, gamma-secretase subunit. (257 aa)    
Predicted Functional Partners:
NCSTN
Nicastrin.
   
 0.996
PSEN1
Presenilin 1.
   
 0.996
PSEN2
Presenilin 2.
   
 0.995
ENSCWAP00000006255
annotation not available
    
 0.995
APH1A
Aph-1 homolog A, gamma-secretase subunit.
  
  
 
0.927
NOTCH1
Notch receptor 1.
    
 0.919
NOTCH3
Notch receptor 3.
    
 0.918
NOTCH4
Notch receptor 4.
    
 0.916
NOTCH2
Notch receptor 2.
    
 0.911
ENSCWAP00000010514
annotation not available
    
 0.876
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.