Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C5orf58Chromosome 5 open reading frame 58. (80 aa)    
Predicted Functional Partners:
TM6SF2
Transmembrane 6 superfamily member 2.
      
 0.632
HAPLN4
Hyaluronan and proteoglycan link protein 4.
      
 0.588
CILP2
Cartilage intermediate layer protein 2.
      
 0.583
CLEC16A
C-type lectin domain containing 16A.
      
 0.508
LPAR2
Lysophosphatidic acid receptor 2.
      
 0.503
TSSK6
Testis specific serine kinase 6.
      
 0.502
KCNIP1
Potassium voltage-gated channel interacting protein 1.
      
 0.501
UBTD2
Ubiquitin domain containing 2.
      
 0.487
SH3PXD2B
SH3 and PX domains 2B.
      
 0.450
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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