STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JRKLJRK like. (524 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
  0.657
GINM1
Glycoprotein integral membrane 1.
      
 0.575
CXorf38
Chromosome X open reading frame 38.
      
 0.567
PAQR5
Progestin and adipoQ receptor family member 5.
      
 0.564
POLB
DNA polymerase beta.
      
 0.548
POGK
Pogo transposable element derived with KRAB domain.
      
 0.543
DEUP1
Deuterosome assembly protein 1.
      
 0.523
LCTL
Lactase like.
      
 0.516
IZUMO1R
IZUMO1 receptor, JUNO.
      
 0.515
PET100
PET100 cytochrome c oxidase chaperone.
      
 0.510
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.