Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD1BGRAM domain containing 1B. (877 aa)    
Predicted Functional Partners:
HTR2C
5-hydroxytryptamine receptor 2C.
   
    0.972
GRAMD2B
GRAM domain containing 2B.
    
 
 0.946
GRAMD1C
GRAM domain containing 1C.
    
 
 0.945
GRAMD1A
GRAM domain containing 1A.
    
   0.893
ENSCWAP00000028556
annotation not available
    
 
 0.680
HMX2
H6 family homeobox 2.
      
 0.677
HMX3
H6 family homeobox 3.
      
 0.677
TBRG1
Transforming growth factor beta regulator 1.
      
 0.658
SCN4B
Sodium voltage-gated channel beta subunit 4.
    
 0.636
ABTB2
Ankyrin repeat and BTB domain containing 2.
      
 0.623
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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