STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYLC1Cylicin 1. (639 aa)    
Predicted Functional Partners:
APAF1
Apoptotic peptidase activating factor 1.
   
 0.815
ENSCWAP00000006582
annotation not available
  
   
 0.799
RIBC1
RIB43A domain with coiled-coils 1.
    
 
 0.789
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.780
CCIN
Calicin.
   
  
 0.763
ARID4A
AT-rich interaction domain 4A.
    
 0.758
ARID4B
AT-rich interaction domain 4B.
    
 0.758
ENSCWAP00000002119
annotation not available
    
 0.755
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
    
 0.747
POLD1
DNA polymerase delta 1, catalytic subunit.
   
 0.727
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.