MINK1 protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MINK1

Misshapen like kinase 1. (1330 aa)

Predicted Functional Partners:

STRN

0.844

ALS2CL

0.724

RNF25

0.684

ATXN2L

0.676

TRAF6

0.676

SURF2

0.646

STRIP1

0.645

MAP3K1

0.643

LSM7

0.639

MYO6

0.634

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALS2CL	ATXN2L	ENSCWAP00000024370	ENSCWAP00000022502	ALS2 C-terminal like.	Ataxin 2 like.	0.864
ALS2CL	MINK1	ENSCWAP00000024370	ENSCWAP00000001925	ALS2 C-terminal like.	Misshapen like kinase 1.	0.724
ATXN2L	ALS2CL	ENSCWAP00000022502	ENSCWAP00000024370	Ataxin 2 like.	ALS2 C-terminal like.	0.864
ATXN2L	MINK1	ENSCWAP00000022502	ENSCWAP00000001925	Ataxin 2 like.	Misshapen like kinase 1.	0.676
LSM7	MINK1	ENSCWAP00000024487	ENSCWAP00000001925	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Misshapen like kinase 1.	0.639
LSM7	RNF25	ENSCWAP00000024487	ENSCWAP00000026536	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Ring finger protein 25.	0.739
MAP3K1	MINK1	ENSCWAP00000004909	ENSCWAP00000001925	Mitogen-activated protein kinase kinase kinase 1.	Misshapen like kinase 1.	0.643
MAP3K1	MYO6	ENSCWAP00000004909	ENSCWAP00000021427	Mitogen-activated protein kinase kinase kinase 1.	Myosin VI.	0.428
MAP3K1	TRAF6	ENSCWAP00000004909	ENSCWAP00000028672	Mitogen-activated protein kinase kinase kinase 1.	TNF receptor associated factor 6.	0.976
MINK1	ALS2CL	ENSCWAP00000001925	ENSCWAP00000024370	Misshapen like kinase 1.	ALS2 C-terminal like.	0.724
MINK1	ATXN2L	ENSCWAP00000001925	ENSCWAP00000022502	Misshapen like kinase 1.	Ataxin 2 like.	0.676
MINK1	LSM7	ENSCWAP00000001925	ENSCWAP00000024487	Misshapen like kinase 1.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.639
MINK1	MAP3K1	ENSCWAP00000001925	ENSCWAP00000004909	Misshapen like kinase 1.	Mitogen-activated protein kinase kinase kinase 1.	0.643
MINK1	MYO6	ENSCWAP00000001925	ENSCWAP00000021427	Misshapen like kinase 1.	Myosin VI.	0.634
MINK1	RNF25	ENSCWAP00000001925	ENSCWAP00000026536	Misshapen like kinase 1.	Ring finger protein 25.	0.684
MINK1	STRIP1	ENSCWAP00000001925	ENSCWAP00000002121	Misshapen like kinase 1.	Striatin interacting protein 1.	0.645
MINK1	STRN	ENSCWAP00000001925	ENSCWAP00000017275	Misshapen like kinase 1.	Striatin.	0.844
MINK1	SURF2	ENSCWAP00000001925	ENSCWAP00000011131	Misshapen like kinase 1.	Surfeit 2.	0.646
MINK1	TRAF6	ENSCWAP00000001925	ENSCWAP00000028672	Misshapen like kinase 1.	TNF receptor associated factor 6.	0.676
MYO6	MAP3K1	ENSCWAP00000021427	ENSCWAP00000004909	Myosin VI.	Mitogen-activated protein kinase kinase kinase 1.	0.428