STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POU3F4POU class 3 homeobox 4. (361 aa)    
Predicted Functional Partners:
SOX1
SRY-box transcription factor 1.
    
 0.681
SOX2
SRY-box transcription factor 2.
    
 0.681
SOX3
SRY-box transcription factor 3.
    
 0.681
ENSCWAP00000009129
annotation not available
    
 0.666
SOX9
SRY-box transcription factor 9.
    
 0.657
SOX10
SRY-box transcription factor 10.
    
 0.655
SOX15
SRY-box transcription factor 15.
    
 0.654
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
    
  0.635
PAX4
Paired box 4.
    
 0.632
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
  0.631
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.