STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAP1BMicrotubule associated protein 1B. (2478 aa)    
Predicted Functional Partners:
ENSCWAP00000006794
annotation not available
    
 0.806
ENSCWAP00000013840
annotation not available
    
 0.806
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
    
 0.804
SQSTM1
Sequestosome 1.
    
 
 0.760
ATG12
Autophagy related 12.
    
 
 0.757
BECN1
Beclin 1.
      
 0.750
FMR1
FMRP translational regulator 1.
    
 
 0.715
ATG5
Autophagy related 5.
      
 0.713
ATG3
Autophagy related 3.
    
 
 0.711
ATG7
Autophagy related 7.
      
 0.696
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.