STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3BGRLSH3 domain binding glutamate rich protein like. (114 aa)    
Predicted Functional Partners:
RAB7B
RAB7B, member RAS oncogene family.
   
    0.867
SELENOO
Selenoprotein O.
   
    0.786
TMEM150A
Transmembrane protein 150A.
      
 0.761
HSPH1
Heat shock protein family H (Hsp110) member 1.
    
 
 0.761
RNF144B
Ring finger protein 144B.
      
 0.741
FRMD4A
FERM domain containing 4A.
      
 0.688
RPS6KA6
Ribosomal protein S6 kinase A6.
      
 0.683
CNOT4
CCR4-NOT transcription complex subunit 4.
      
 0.677
BRWD3
Bromodomain and WD repeat domain containing 3.
      
 0.639
APOOL
Apolipoprotein O like.
      
 0.632
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.