STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000001959annotation not available (238 aa)    
Predicted Functional Partners:
SSB
Small RNA binding exonuclease protection factor La.
    
   0.771
ZNF219
Zinc finger protein 219.
      
 0.570
ENSCWAP00000000174
annotation not available
   
  
 0.533
ENSCWAP00000010439
annotation not available
   
  
 0.533
ENSCWAP00000018855
annotation not available
   
  
 0.533
CBX8
Chromobox 8.
    
   0.529
TCF19
Transcription factor 19.
      
 0.519
PHF10
PHD finger protein 10.
      
 0.517
ENSCWAP00000025775
annotation not available
      
 0.502
WFDC11
WAP four-disulfide core domain 11.
  
     0.495
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.