Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR81WD repeat domain 81. (1937 aa)    
Predicted Functional Partners:
WDR91
WD repeat domain 91.
   
 
 0.991
NBR1
NBR1 autophagy cargo receptor.
   
 0.926
ENSCWAP00000002148
annotation not available
    
 
 0.908
BECN1
Beclin 1.
    
 
 0.908
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.723
MTMR3
Myotubularin related protein 3.
      
 0.698
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
   
 
 0.697
COMMD2
COMM domain containing 2.
      
 0.683
GABARAP
GABA type A receptor-associated protein.
    
 0.679
GABARAPL1
GABA type A receptor associated protein like 1.
    
 0.679
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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