Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LCP1Lymphocyte cytosolic protein 1. (627 aa)    
Predicted Functional Partners:
PLS3
Plastin 3.
   
   0.954
CENPE
Centromere protein E.
    
   0.948
PLS1
Plastin 1.
   
   0.938
CAPZB
Capping actin protein of muscle Z-line subunit beta.
    
 0.913
CORO1A
Coronin 1A.
   
 
 0.864
LAPTM5
Lysosomal protein transmembrane 5.
   
    0.822
ATXN2
Ataxin 2.
    
 
 0.817
DBNL
Drebrin like.
   
 
 0.809
DBN1
Drebrin 1.
   
 
 0.809
CAP1
Cyclase associated actin cytoskeleton regulatory protein 1.
   
 
 0.804
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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