FCMR protein (Catagonus wagneri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

FCMR

Fc fragment of IgM receptor. (403 aa)

Predicted Functional Partners:

JCHAIN

0.959

MS4A1

0.873

HNRNPA2B1

0.850

ENSCWAP00000014703

0.850

ENSCWAP00000023176

0.850

MIS12

0.844

TREML2

0.830

ENSCWAP00000019980

0.819

PIGR

0.809

ENSCWAP00000010131

0.800

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCWAP00000010131	ENSCWAP00000014703	ENSCWAP00000010131	ENSCWAP00000014703	annotation not available	annotation not available	0.773
ENSCWAP00000010131	ENSCWAP00000023176	ENSCWAP00000010131	ENSCWAP00000023176	annotation not available	annotation not available	0.773
ENSCWAP00000010131	FCMR	ENSCWAP00000010131	ENSCWAP00000001980	annotation not available	Fc fragment of IgM receptor.	0.800
ENSCWAP00000010131	HNRNPA2B1	ENSCWAP00000010131	ENSCWAP00000000415	annotation not available	Heterogeneous nuclear ribonucleoprotein A2/B1.	0.773
ENSCWAP00000014703	ENSCWAP00000010131	ENSCWAP00000014703	ENSCWAP00000010131	annotation not available	annotation not available	0.773
ENSCWAP00000014703	FCMR	ENSCWAP00000014703	ENSCWAP00000001980	annotation not available	Fc fragment of IgM receptor.	0.850
ENSCWAP00000014703	PIGR	ENSCWAP00000014703	ENSCWAP00000001964	annotation not available	Polymeric immunoglobulin receptor.	0.722
ENSCWAP00000019980	FCMR	ENSCWAP00000019980	ENSCWAP00000001980	annotation not available	Fc fragment of IgM receptor.	0.819
ENSCWAP00000019980	JCHAIN	ENSCWAP00000019980	ENSCWAP00000001224	annotation not available	Joining chain of multimeric IgA and IgM.	0.655
ENSCWAP00000019980	PIGR	ENSCWAP00000019980	ENSCWAP00000001964	annotation not available	Polymeric immunoglobulin receptor.	0.844
ENSCWAP00000019980	TREML2	ENSCWAP00000019980	ENSCWAP00000005915	annotation not available	Triggering receptor expressed on myeloid cells like 2.	0.819
ENSCWAP00000023176	ENSCWAP00000010131	ENSCWAP00000023176	ENSCWAP00000010131	annotation not available	annotation not available	0.773
ENSCWAP00000023176	FCMR	ENSCWAP00000023176	ENSCWAP00000001980	annotation not available	Fc fragment of IgM receptor.	0.850
ENSCWAP00000023176	PIGR	ENSCWAP00000023176	ENSCWAP00000001964	annotation not available	Polymeric immunoglobulin receptor.	0.722
FCMR	ENSCWAP00000010131	ENSCWAP00000001980	ENSCWAP00000010131	Fc fragment of IgM receptor.	annotation not available	0.800
FCMR	ENSCWAP00000014703	ENSCWAP00000001980	ENSCWAP00000014703	Fc fragment of IgM receptor.	annotation not available	0.850
FCMR	ENSCWAP00000019980	ENSCWAP00000001980	ENSCWAP00000019980	Fc fragment of IgM receptor.	annotation not available	0.819
FCMR	ENSCWAP00000023176	ENSCWAP00000001980	ENSCWAP00000023176	Fc fragment of IgM receptor.	annotation not available	0.850
FCMR	HNRNPA2B1	ENSCWAP00000001980	ENSCWAP00000000415	Fc fragment of IgM receptor.	Heterogeneous nuclear ribonucleoprotein A2/B1.	0.850
FCMR	JCHAIN	ENSCWAP00000001980	ENSCWAP00000001224	Fc fragment of IgM receptor.	Joining chain of multimeric IgA and IgM.	0.959