STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EMSYEMSY transcriptional repressor, BRCA2 interacting. (1337 aa)    
Predicted Functional Partners:
PHF12
PHD finger protein 12.
   
 
 0.973
CBX1
Chromobox 1.
    
 
 0.972
GATAD1
GATA zinc finger domain containing 1.
    
 
 0.952
CBX5
Chromobox 5.
    
 
 0.909
SIN3A
SIN3 transcription regulator family member A.
   
 
 0.904
SIN3B
SIN3 transcription regulator family member B.
   
 
 0.904
MORF4L2
Mortality factor 4 like 2.
   
 
 0.898
MORF4L1
Mortality factor 4 like 1.
   
 
 0.898
HDAC2
Histone deacetylase 2.
    
 
 0.838
HDAC1
Histone deacetylase 1.
    
 
 0.838
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.