STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D8TBC1 domain family member 8. (1158 aa)    
Predicted Functional Partners:
TBC1D8B
TBC1 domain family member 8B.
    
   0.765
TBC1D21
TBC1 domain family member 21.
      
 0.722
TBC1D13
TBC1 domain family member 13.
      
 0.713
CDC16
Cell division cycle 16.
      
 0.699
GAK
Cyclin G associated kinase.
   
 
  0.693
TBC1D19
TBC1 domain family member 19.
      
 0.654
TBC1D20
TBC1 domain family member 20.
      
 0.652
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
   
 
  0.628
TBC1D17
TBC1 domain family member 17.
      
 0.614
AP5M1
Adaptor related protein complex 5 subunit mu 1.
     
 0.613
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.