Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
HCN1Hyperpolarization activated cyclic nucleotide gated potassium channel 1. (882 aa)    
Predicted Functional Partners:
HCN3
Hyperpolarization activated cyclic nucleotide gated potassium channel 3.
  
 
0.966
HCN2
Hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2.
  
  
 
0.947
HCN4
Hyperpolarization activated cyclic nucleotide gated potassium channel 4.
  
  
 
0.751
KCNE2
Potassium voltage-gated channel subfamily E regulatory subunit 2.
    
 0.739
SCN5A
Sodium voltage-gated channel alpha subunit 5.
    
 0.737
SCN9A
Sodium voltage-gated channel alpha subunit 9.
    
 0.612
SCN3A
Sodium voltage-gated channel alpha subunit 3.
    
 0.605
SCN2A
Sodium voltage-gated channel alpha subunit 2.
    
 0.605
SCN1A
Sodium voltage-gated channel alpha subunit 1.
    
 0.605
SCN7A
Sodium voltage-gated channel alpha subunit 7.
    
 0.605
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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