STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PITX1Paired like homeodomain 1. (315 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 
 0.848
RBPMS
RNA binding protein, mRNA processing factor.
    
 
 0.768
PITX3
Paired like homeodomain 3.
   
   0.752
AHCYL1
Adenosylhomocysteinase like 1.
    
   0.699
AHCYL2
Adenosylhomocysteinase like 2.
    
   0.699
TBX4
T-box transcription factor 4.
    
 
 0.660
LEF1
Lymphoid enhancer binding factor 1.
    
 
 0.641
TBX5
T-box transcription factor 5.
    
 
 0.610
GLI3
GLI family zinc finger 3.
    
 
 0.595
AR
Androgen receptor.
    
 
 0.580
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.