STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITX1Paired like homeodomain 1. (315 aa)    
Predicted Functional Partners:
NR5A1
Nuclear receptor subfamily 5 group A member 1.
   
 
 0.677
SKOR1
SKI family transcriptional corepressor 1.
      
 0.674
POU1F1
POU class 1 homeobox 1.
   
 
 0.667
CAMLG
Calcium modulating ligand.
      
 0.639
DDX46
DEAD-box helicase 46.
      
 0.619
TBX4
T-box transcription factor 4.
      
 0.595
LHX3
LIM homeobox 3.
   
  
 0.593
TBX19
T-box transcription factor 19.
   
 
 0.592
PKN2
Protein kinase N2.
      
 0.586
PLAG1
PLAG1 zinc finger.
    
 
 0.571
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.