STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSHZ3Teashirt zinc finger homeobox 3. (1082 aa)    
Predicted Functional Partners:
MEIS2
Meis homeobox 2.
   
 0.947
MEIS1
Meis homeobox 1.
   
 0.947
HOXB6
Homeobox B6.
    
 
 0.830
HOXB7
Homeobox B7.
   
 
 0.797
IRX5
Iroquois homeobox 5.
    
 0.704
IRX3
Iroquois homeobox 3.
    
 0.701
YAP1
Yes associated protein 1.
     
 0.699
WWTR1
WW domain containing transcription regulator 1.
     
 0.699
IRX2
Iroquois homeobox 2.
    
 0.648
IRX1
Iroquois homeobox 1.
    
 0.577
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.