STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKNOX2PBX/knotted 1 homeobox 2. (472 aa)    
Predicted Functional Partners:
PBX1
PBX homeobox 1.
    
 0.872
PBX4
PBX homeobox 4.
    
 0.872
PBX3
PBX homeobox 3.
    
 0.872
PBX2
PBX homeobox 2.
    
 0.872
HOXB1
Homeobox B1.
    
 0.866
LMX1A
LIM homeobox transcription factor 1 alpha.
    
 
 0.820
LMX1B
LIM homeobox transcription factor 1 beta.
    
 
 0.820
C5orf24
Chromosome 5 open reading frame 24.
    
   0.817
ENSCWAP00000002723
annotation not available
   
   0.749
ENSCWAP00000002759
annotation not available
   
   0.749
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.