STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF143Zinc finger protein 143. (638 aa)    
Predicted Functional Partners:
THAP11
THAP domain containing 11.
     
 0.951
ZNF76
Zinc finger protein 76.
  
  
 
0.937
HCFC1
Host cell factor C1.
    
 0.883
HCFC2
Host cell factor C2.
    
 0.852
TAF9B
TATA-box binding protein associated factor 9b.
    
 0.821
TBPL2
TATA-box binding protein like 2.
    
 0.741
TBP
TATA-box binding protein.
    
 0.741
GTF2A2
General transcription factor IIA subunit 2.
     
 0.731
ENSCWAP00000001397
annotation not available
     
 0.731
ENSCWAP00000001590
annotation not available
     
 0.731
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.