Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRPF8pre-mRNA processing factor 8. (2321 aa)    
Predicted Functional Partners:
PRPF6
pre-mRNA processing factor 6.
   
 0.999
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.999
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
 0.999
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
   
 0.999
DDX23
DEAD-box helicase 23.
   
 0.999
TXNL4A
Thioredoxin like 4A.
    
 0.998
PRPF3
pre-mRNA processing factor 3.
   
 0.997
PRPF4
pre-mRNA processing factor 4.
   
 0.997
SF3B3
Splicing factor 3b subunit 3.
   
 0.996
SF3B1
Splicing factor 3b subunit 1.
   
 0.996
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.