STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMP2Lysosomal associated membrane protein 2. (412 aa)    
Predicted Functional Partners:
LAMP1
Lysosomal associated membrane protein 1.
   
 0.996
ENSCWAP00000011714
annotation not available
    
 
 0.948
ENSCWAP00000025403
annotation not available
    
 
 0.948
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
 
 0.920
GORASP2
Golgi reassembly stacking protein 2.
    
 0.902
GORASP1
Golgi reassembly stacking protein 1.
    
 0.900
SNCA
Synuclein alpha.
   
 
 0.889
EEA1
Early endosome antigen 1.
      
 0.887
ENSCWAP00000021825
annotation not available
   
 
 0.878
UCHL1
Ubiquitin C-terminal hydrolase L1.
    
 
 0.873
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.