Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RILPRab interacting lysosomal protein. (392 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
 0.991
ENSCWAP00000021877
annotation not available
     
 0.891
RAB7B
RAB7B, member RAS oncogene family.
    
 0.866
DYNLRB2
Dynein light chain roadblock-type 2.
     
 0.860
DYNLRB1
Dynein light chain roadblock-type 1.
     
 0.860
DYNC1LI2
Dynein cytoplasmic 1 light intermediate chain 2.
     
 0.858
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
     
 0.858
DYNC2H1
Dynein cytoplasmic 2 heavy chain 1.
     
 0.856
DCTN3
Dynactin subunit 3.
     
 0.849
DCTN5
Dynactin subunit 5.
     
  0.844
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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