Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC82Coiled-coil domain containing 82. (521 aa)    
Predicted Functional Partners:
ENSCWAP00000001530
annotation not available
      
 0.700
LRRC2
Leucine rich repeat containing 2.
      
 0.615
FAN1
FANCD2 and FANCI associated nuclease 1.
      
 0.584
C11orf54
Chromosome 11 open reading frame 54.
      
 0.583
PMS1
PMS1 homolog 1, mismatch repair system component.
      
 0.582
MLH3
mutL homolog 3.
      
 0.582
ENSCWAP00000023073
annotation not available
      
 0.535
ASPHD1
Aspartate beta-hydroxylase domain containing 1.
      
 0.523
TMEM231
Transmembrane protein 231.
      
 0.519
POGK
Pogo transposable element derived with KRAB domain.
      
 0.519
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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